Index
A
|
C
|
F
|
G
|
I
|
J
|
L
|
M
|
N
|
P
|
R
|
S
|
U
|
W
A
AbstractFragmentor (class in smiter.fragmentation_functions)
AbstractNoiseInjector (class in smiter.noise_functions)
C
calc_mz() (in module smiter.lib)
check_mzml_params() (in module smiter.lib)
check_peak_properties() (in module smiter.lib)
csv_to_peak_properties() (in module smiter.lib)
F
fragment() (smiter.fragmentation_functions.AbstractFragmentor method)
(smiter.fragmentation_functions.LipidFragmentor method)
(smiter.fragmentation_functions.NucleosideFragmentor method)
(smiter.fragmentation_functions.PeptideFragmentor method)
(smiter.fragmentation_functions.PeptideFragmentorPyteomics method)
G
gamma_dist() (in module smiter.peak_distribution)
gauss_dist() (in module smiter.peak_distribution)
gauss_tail() (in module smiter.peak_distribution)
GaussNoiseInjector (class in smiter.noise_functions)
generate_interval_tree() (in module smiter.synthetic_mzml)
generate_molecule_isotopologue_lib() (in module smiter.synthetic_mzml)
generate_scans() (in module smiter.synthetic_mzml)
I
i() (smiter.synthetic_mzml.Scan property)
id() (smiter.synthetic_mzml.Scan property)
inject_noise() (smiter.noise_functions.AbstractNoiseInjector method)
(smiter.noise_functions.GaussNoiseInjector method)
(smiter.noise_functions.JamssNoiseInjector method)
(smiter.noise_functions.PPMShiftInjector method)
(smiter.noise_functions.UniformNoiseInjector method)
J
JamssNoiseInjector (class in smiter.noise_functions)
L
LipidFragmentor (class in smiter.fragmentation_functions)
M
main() (in module smiter.ext.trim_lines)
module
smiter
smiter.ext
smiter.ext.nucleoside_fragment_kb
smiter.ext.trim_lines
smiter.fragmentation_functions
smiter.lib
smiter.noise_functions
smiter.peak_distribution
smiter.synthetic_mzml
ms_level() (smiter.synthetic_mzml.Scan property)
mz() (smiter.synthetic_mzml.Scan property)
N
NucleosideFragmentor (class in smiter.fragmentation_functions)
P
peak_properties_to_csv() (in module smiter.lib)
PeptideFragmentor (class in smiter.fragmentation_functions)
PeptideFragmentorPyteomics (class in smiter.fragmentation_functions)
PPMShiftInjector (class in smiter.noise_functions)
precursor_charge() (smiter.synthetic_mzml.Scan property)
precursor_i() (smiter.synthetic_mzml.Scan property)
precursor_mz() (smiter.synthetic_mzml.Scan property)
R
rescale_intensity() (in module smiter.synthetic_mzml)
retention_time() (smiter.synthetic_mzml.Scan property)
S
Scan (class in smiter.synthetic_mzml)
smiter
module
smiter.ext
module
smiter.ext.nucleoside_fragment_kb
module
smiter.ext.trim_lines
module
smiter.fragmentation_functions
module
smiter.lib
module
smiter.noise_functions
module
smiter.peak_distribution
module
smiter.synthetic_mzml
module
U
UniformNoiseInjector (class in smiter.noise_functions)
W
write_mzml() (in module smiter.synthetic_mzml)
write_scans() (in module smiter.synthetic_mzml)
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